rs32761557 SNP Detail

Summary

• ID
  rs32761557
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50969630 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCAATATTA TAATTATACC
  CACCACTAAA AATCACTAAT AAAGAAACAC AATTCGTTTT GGGAAATATT TTTGCTAAAT
  TCTGTAATAG TATAACTGCT TCCTTCTTCT ATCAATGCAT TTTGTTTGTA ACACTTAAAA
  GTATTGTTTA AGGATATGGG GATATAGCCA ACCAAATGCA ACTTGTCTGG CATGTGTGAA
  R
  CCCTGAGTTC CTAGGACCAC TTAAAAATGA ATATGGAAGA AAGAAAAGCA GGAAAGAAGG
  ACAAACGGAC ACATGAGAGA CAGACAGAGA CAGATAGAGA AAGAATGTTC CCTTGTCCTG
  GCAAAGGGGC AAATGCATTT AAAAGTAGCA ATCAAGAACC AATTGTAGAT AAGTCATCGG
  AAAAATGTAT CTGTAATTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47710428	NES11307357	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32761557					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47710428	NES11307357	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50969630 () rs orientation: forward

Symbol	Name	Function Class
Gm32681	predicted gene, 32681	within coordinates
Layn	layilin	within coordinates
Tssr89523	transcription start site region 89523	1870 bp upstream
Tssr89524	transcription start site region 89524	1627 bp upstream
Tssr89525	transcription start site region 89525	1334 bp upstream
Tssr89526	transcription start site region 89526	1301 bp upstream
Tssr89527	transcription start site region 89527	1245 bp upstream