rs32761733 SNP Detail

Summary

• ID
  rs32761733
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:45231205 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAGA TGTGAGCAAC CATGGGAGGT
  Y
  ATTTTTTATG TTGGTGCCAA CAATA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss48208407	NES12148680	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C		T	C	T		C
ss325166369	CHEV_16_45410955	CHEVERUD	SCREENING_POP	f	SNP									C				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32761733					SNP	C	C	C	C	C	C	C	C	C	T	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48208407	NES12148680	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:45231205 () rs orientation: forward

Symbol	Name	Function Class
2300009N04Rik	RIKEN cDNA 2300009N04 gene	1833 bp upstream
Cd200	CD200 molecule	1789 bp upstream
Cd200l1	CD200 molecule like 1	926 bp downstream
Cpgi8295	CpG island 8295	1879 bp distal
Gm5406	predicted gene 5406	738 bp upstream
Rr318481	regulatory region 318481	1596 bp proximal
Rr325366	regulatory region 325366	1204 bp distal
Tssr138625	transcription start site region 138625	678 bp upstream
Tssr141234	transcription start site region 141234	1892 bp upstream
Tssr141235	transcription start site region 141235	1794 bp upstream