rs32762147 SNP Detail

Summary

• ID
  rs32762147
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:178231864 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACA AACTACAAGC TACAGGTGCG
  Y
  GCGCACACAC GCACACACAC ACACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45190725	mCV22363728	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss146355565	ENSMUSSNP2455098	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32762147					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:178231864 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1092	CpG island 1092	1328 bp proximal
Efcab2	EF-hand calcium binding domain 2	1786 bp upstream
Gm70920	predicted gene, 70920	1611 bp downstream
Rr20725	regulatory region 20725	1664 bp distal
Rr29069	regulatory region 29069	936 bp proximal
Rr372517	regulatory region 372517	922 bp upstream
Tssr10392	transcription start site region 10392	1718 bp upstream
Tssr10393	transcription start site region 10393	1732 bp upstream
Tssr10394	transcription start site region 10394	1739 bp upstream
Tssr10395	transcription start site region 10395	1753 bp upstream
Tssr10396	transcription start site region 10396	1773 bp upstream