rs32762246 SNP Detail

Summary

• ID
  rs32762246
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50800704 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGGTGACA AGGTGACACT
  GACTAATAAC AGTGCTCTTT GCTGGCCTTC CTGTATTACT TGTTCTGGGG GAGCCGACTT
  AGAGCACGGT GTGCTTGCCT TTGTCTTCTT CCTGTGCAGA TGCAGTGATG GGCTCTATTA
  CACCAGGAGC ATTAGCCAGG CTCAGAGAGG CCCTGACTGT GTGAGGGCTG TGCTTAGCAG
  K
  GTTTCCATCG GCCATCTGTA GTGGCTAACG TGTACTCAGG CAATTTAGGG CGAGGTATTA
  TTTACCCTGC TGACGTCAAT GAGAACATAT TATCCAGTGT CTTTTCTGTA GTTTGAAATG
  AGCACCAGAG CTCAGAGAAC ACAGCCACCT TCCACAGTCT GAAAACTCTA CTCACTGCTC
  AATGAGGTGG ATGGAGTCCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47709506	NES11314184	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32762246					SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47709506	NES11314184	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50800704 () rs orientation: forward

Symbol	Name	Function Class
Gm25558	predicted gene, 25558	1349 bp downstream
Ppp2r1b	protein phosphatase 2, regulatory subunit A, beta	within coordinates
Rr195477	regulatory region 195477	704 bp distal
Rr209487	regulatory region 209487	305 bp distal