rs32762248 SNP Detail

Summary

• ID
  rs32762248
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50801070 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTACTCAC TGCTCAATGA
  GGTGGATGGA GTCCTGCCTA TAATCTCATG AGTCTGATAT TCATATCACC AGGCTTTTAG
  AAAACAAGGT GTTTTTATTT TAATTCAGGA GAGTTGGAAA CATAAAAACA GTACATTTTC
  CTGGCAGAAA ATGACCCCAT TTACATTACA ATTTGGTACA AAGATCATTT ATTAAACTGC
  R
  TTTTAGGCAA TTTTCTAACA CTGAGTGACA GGTGACATTT TGATTTTTTC ACACTGGATC
  TATTATGATT TGCACACAAA ATACCAAAGC TATTGAAGTC GCCAAATTTC TCTTAGTAAT
  TAAAAAGCAT GAAAGAAAAA AATGACTACA GTCAGATTAA GTTTATGGAA AGTAACTCAC
  AGAGCAAGCT GAATTCAGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46313973	mCV25210043	ABI	CRAMUS_MOUSE	f	SNP		G	A					A		A
ss47709508	NES11314185	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	A	A		A	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32762248					SNP	G	G	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47709508	NES11314185	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50801070 () rs orientation: forward

Symbol	Name	Function Class
Gm25558	predicted gene, 25558	1715 bp downstream
Ppp2r1b	protein phosphatase 2, regulatory subunit A, beta	within coordinates