rs32762672 SNP Detail

Summary

• ID
  rs32762672
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:121747800 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCAGGTTC AGTTCCCAGC
  ACTCACATGG CCCTACGACC ATCTATTACT CCAGTTCCAG AGGATCTGAT GGGTTTCTGG
  CTTCCATGGT CACCAGACAT ATATGTGGTA AAGACATATG CAGCCAAAAT ATCCTACACA
  CCTAATCTGT CAACAGTTGC CATACCATCG TCTGAGGAGG ACAGAAAGGT CTGTTCCTGA
  Y
  ACTCTAGCCC TGTGGTTCTG CAGATGGTTG GAACCTGCCT GGCTTGGGCC TACAGAGCAA
  CAGCACCCTC CCAGCATGGA GTCACATGAC CCAAGTACTG CTCAGAACCC TGTCCTATCC
  CCAGGCTACA CAGTCCACAC AGATGACAGG CCACTTTCCT GCTGCTAAGA TGGGACCAAT
  AACCACAATT TCTTGTGCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47209782	NES11592159	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32762672					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47209782	NES11592159	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:121747800 () rs orientation: forward

Symbol	Name	Function Class
Dctn5	dynactin 5	within coordinates
Gm15489	predicted gene 15489	within coordinates
Rr153390	regulatory region 153390	1000 bp distal
Tssr68863	transcription start site region 68863	281 bp downstream