rs32764261 SNP Detail

Summary

• ID
  rs32764261
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:181100244 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCCCCTCC TTTCTCCCTC
  CCTCCCCTCC TCCTTCCCCT TCTCCCTCTC CCTCTTTCCC TCTCCCTTTC TCCTTTCTCC
  CCCCTCCTTT CTCCCTCCCT CCCCTCTCCC TCTCTAGAAA GTTCCTGGAG AACAAGGACC
  CTGTCTAAAG CCCATATCCC TTTGAGCCAC TCCTGGGGTC CCCAGGTCAC TGCTAGGCTG
  R
  CTGGCTGATC CTTACAGAAT GTCTGGAAGC TTTTCTGTGT TTGTTCAGGC TCCTTTGGGG
  TTAGCGCAGA AACCAATTCT GCTTTGGGGA CACCCAAGAA CTCTGAGTCT AGAGAGGAGT
  GACTGCCCTA AGAGATTTGG AGTTTTTTTC CCAGGTCCTG CTTCTTCTCA GGCTTCAGGT
  GAGCAGTGTA GTGGCGTGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46725439	NES10651540	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32764261					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46725439	NES10651540	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:181100244 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1134	CpG island 1134	184 bp proximal
Gm39717	predicted gene, 39717	within coordinates
Rr372547	regulatory region 372547	1336 bp downstream
Rr424716	regulatory region 424716	487 bp distal
Rr424717	regulatory region 424717	within coordinates
Rr424718	regulatory region 424718	370 bp proximal
Rr424719	regulatory region 424719	492 bp proximal
Rr424720	regulatory region 424720	979 bp proximal