rs32765928 SNP Detail

Summary

• ID
  rs32765928
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:181101500 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATCTGAGTC CTTGGTTTGT
  CACAGGCACC TGCACTCATG TGCACATGCC TGCCCCACTT TGCACATAAT TTAAACACAT
  CTTAATTAAC ATCAACATAG AAGTGCTCCC GGAGCTTCCC CCCCCCCCCC CCCCCCCCCC
  GCCGGCCACT TTTGTTTCTG CGTCTGCACA GGCCAGAGGA CTGGTCTGTC TCTAGTTCTT
  M
  CATATCTCAG TGAGTCACAG AGCTGGAATT TGACTGGGGT CTTTATGGCT CCAAAGGGCT
  AAAAGTCCAG TTAAACTAGC AGATCTCTGA CAGGGTTGGG AGGCAGCCAC CCATTTATGG
  TGCTGGCAGC AGCTGTGTGT TTGGACAGAT GCTGATGGTC CATCGCTATA GGGTGCCTTT
  GATCTCTCCG GATATTTATG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46725460	NES10651551	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32765928					SNP	C	C	C	C	C	C	C	C	C	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46725460	NES10651551	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:181101500 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1134	CpG island 1134	751 bp distal
Gm39717	predicted gene, 39717	within coordinates
Rr424716	regulatory region 424716	1743 bp distal
Rr424717	regulatory region 424717	406 bp distal
Rr424718	regulatory region 424718	865 bp distal
Rr424719	regulatory region 424719	743 bp distal
Rr424720	regulatory region 424720	within coordinates