rs32766954 SNP Detail

Summary

• ID
  rs32766954
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:85417122 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGGA GCTGGCATAC AATGTGACCA
  Y
  CTCCCTACCA TCCCCTCCTC CAGGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46188996	mCV24193307	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C	T
ss145392125	ENSMUSSNP1142243	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T
ss322751356	CHEV_8_87214392	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32766954					SNP	T	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:85417122 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20706	CpG island 20706	444 bp distal
Rr666576	regulatory region 666576	1019 bp distal
Rr666577	regulatory region 666577	1250 bp distal
Rr666578	regulatory region 666578	680 bp distal
Trmt1	tRNA methyltransferase 1	within coordinates
Tssr78430	transcription start site region 78430	1190 bp downstream
Tssr78431	transcription start site region 78431	1175 bp downstream