rs32767682 SNP Detail

Summary

• ID
  rs32767682
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50968746 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGGAGGCCTT TGCTTCTCCT
  TTTGCATTCT TGCCAGGTTT TTCCTGTGTC TTAGTAATAT ATTTCATTTT CTACCCATCC
  ACTCTCCTTG CTCCTCCCCA TTCGGTCCGG GGAGAATTCA TAGATGTCAT TGGTCACAAA
  TCCACTCTCC ATACTTGCCA AAGTCACAAA CCCACTTTCC GAAGGGTTCA CAGCAATGTT
  Y
  TCATAGTCAC AAGACATGTC ATCAGGCATA GCTTCCCCAG AACACACCCG GAAGGAGATG
  TTCTTCAGGT CTGGCCGGGG CTCAGCTAAA TCAGCTTCAC TTTGTTTTCT GATGACATTG
  TAAACATCTA GGTTGGGGCT GTTTTCTTGG CGAGGAGTGG GCCAAATGGT GTGCTGCTCC
  TTTGTGCTAG GGTCTGTCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47710422	NES11307424	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32767682					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47710422	NES11307424	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50968746 () rs orientation: forward

Symbol	Name	Function Class
Gm32681	predicted gene, 32681	within coordinates
Layn	layilin	within coordinates
Tssr89523	transcription start site region 89523	986 bp upstream
Tssr89524	transcription start site region 89524	743 bp upstream
Tssr89525	transcription start site region 89525	450 bp upstream
Tssr89526	transcription start site region 89526	417 bp upstream
Tssr89527	transcription start site region 89527	361 bp upstream