rs32770744 SNP Detail

Summary

• ID
  rs32770744
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137720068 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAAG ACTGTGGGAA GATATCCACT
  Y
  TACAGAGCTT AGGGTCAGTT TCTGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45691447	mCV22624745	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss147628335	ENSMUSSNP2005829	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
ss321369514	CHEV_4_137548672	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs32770744					SNP	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137720068 () rs orientation: forward

Symbol	Name	Function Class
BE691133	expressed sequence BE691133	within coordinates
Cpgi15142	CpG island 15142	within coordinates
Eif4g3	eukaryotic translation initiation factor 4 gamma, 3	within coordinates
Gm70263	predicted gene, 70263	1762 bp downstream
Rr86596	regulatory region 86596	1868 bp distal
Rr100351	regulatory region 100351	within coordinates
Rr398623	regulatory region 398623	540 bp upstream
Tssr39803	transcription start site region 39803	259 bp upstream
Tssr39804	transcription start site region 39804	283 bp upstream
Tssr39805	transcription start site region 39805	688 bp upstream
Tssr39806	transcription start site region 39806	721 bp upstream
Tssr39807	transcription start site region 39807	924 bp upstream
Tssr39808	transcription start site region 39808	1163 bp upstream
Tssr39809	transcription start site region 39809	1274 bp upstream
Tssr44154	transcription start site region 44154	527 bp downstream
Tssr44155	transcription start site region 44155	1955 bp downstream