rs32771517 SNP Detail

Summary

• ID
  rs32771517
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:151418395 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTTTGATC CCTGGAACCC
  ACATGGTAGA AAGAAAGAGC CAATCCTTCT GAGTTGTCAT CTGAACTCCA CATGAACTTC
  ATGGCATGCA CGCATACATT CTTACATACA TACATACATA CATACATACA TACATACATA
  CATACTACTT TGAAAGACAA AAAGCATTAG GTATCAAAAC TCCTATACCT TGGACAAAAT
  R
  CTTAGCCTCT GTAAGAACTT GCTTGTGGCA TGTGATATAT GTGTGTGTCA TGCACATGAT
  ATATATGTGT ATGTGTGATG TCTGTGCATG CATGCTGTAT GTATGTGTAT AGTATGTGTG
  GTATATGTGT GTGTAGTATC TATGTGTGCA CAGTATGAAG ATGTATAGTA TGTGGTATGG
  GTTCTTTGTG TGTGTTTGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46726725	NES10996266	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32771517					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46726725	NES10996266	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151418395 () rs orientation: forward

Symbol	Name	Function Class
Camta1	calmodulin binding transcription activator 1	Intron
Cpgi15370	CpG island 15370	1102 bp proximal
Rr605571	regulatory region 605571	1481 bp distal
Rr605572	regulatory region 605572	1487 bp proximal
Rr605573	regulatory region 605573	1588 bp proximal