rs32771520 SNP Detail

Summary

• ID
  rs32771520
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151419161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTATGTAT ATAGTGCAGA
  GAAGTCAGCC TCCAGCATAC ATGTGTGGTG TGTCTGCAGT ATGTATGTGT ATAGCATACA
  TATGTGTGTA TGTGCAAGCG TGTGCATTCC TCTGTGTGTG TGTGTTGGCC ATGAGCACTT
  TACCACGACA GAGACAAAAC AAAGGCTATT GTGAGGGCAT TTCCCAGGAG CACACTAAAA
  R
  AGTCTTGTCC GCATCCTGGC TGCACCTCTG GGCTGGACAC TCGACCTCCA TGGTAGCTTC
  TGTTCTCCAC TCCCCTCCCC ACCCCCAATC TCAGAACAGC ACTTTGAGTT CCCTAAAGTG
  GAAACTATGC CCTAACACAA CCCCCTTCCC TGCCGTTGTC TGGACTTGGT GCTCCTGTTA
  GGGGTGCTGG AGCCATGGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46726728	NES10996160	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32771520					SNP	G	G	G	G	G	G	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46726728	NES10996160	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151419161 () rs orientation: forward

Symbol	Name	Function Class
Camta1	calmodulin binding transcription activator 1	within coordinates
Cpgi15370	CpG island 15370	336 bp proximal
Rr605572	regulatory region 605572	721 bp proximal
Rr605573	regulatory region 605573	822 bp proximal