rs32772393 SNP Detail

Summary

• ID
  rs32772393
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150534044 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCCATTTA GGTGAGGGAG
  ATTGCTTAAA GTAGTCCACC ATTGTAGATG ACTTTTCTTT TTAACTAGAC TGCTATTTAA
  TAATTTGTCT TTGTTTCTCG GGGAAGTGAG GATGACTCTA GTAGTAAATA ACTTAATGGC
  ATAGAATGTT CAGTAATCTA ATCGATGGTG GTCATTGAGA CTCTTTTTAT TATTATTATT
  W
  TTTTAGAAAT CTCTTGTTTA TATTGAAACA CAATAGATTA TAATTAGCCA TGACAAAATT
  TTCCAGTTTT TAAGAAATAC TACTACTTGA CAGATTTATC TAGAACCAGG GTAGTATTTG
  AGATTTTGGG TTTTTTTTGT TTGTTTGTTT TCAGTGTTAC TCATTTTTAA TTCAGTCACT
  GCATTGCTGG CTACATTGTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45692498	mCV24963631	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T	T
ss148053426	ENSMUSSNP4612476	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32772393					SNP	A	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150534044 () rs orientation: forward

Symbol	Name	Function Class
Gm52709	predicted gene, 52709	within coordinates
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr605302	regulatory region 605302	1735 bp distal
Rr605303	regulatory region 605303	1496 bp proximal