rs32774018 SNP Detail

Summary

• ID
  rs32774018
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151420421 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGAGACTTG AAATTGCTTA
  TATCAATTTC CTTGTTCGGC AAAGACTTTC TTAAAGTGTG TTATAAGTAG TTTTCCCATT
  GCCCCAAAGG AAAGGGCTCA GCTGGGCTTC TTGCAGGGGA CCCTCAGCCA GACTCTAGAA
  ATAGCATTGA ATACTGAAGA CAGTCCCCAA GAAGCTGGCA GCTGAGAGGT CCCTGCCTAA
  Y
  GGACAACAGC AAGAATACAA CCTTCTGTCT CCAGCTCTGT GTTGATGGAG GCAGAAAGAC
  TGCATTCCAG AGATGTATAC AGATAGAGAA GTTTGTGCTG TGGACGCTGT CTTTCTGGGG
  ATACCAGAGG GTCAGCACAG CAAAGGAACA CCAAAAGCCA GTGTCTAAGT ACATGTTCTG
  TAAGAAGGGT ATGGGGGTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46726761	NES10996196	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32774018					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46726761	NES10996196	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151420421 () rs orientation: forward

Symbol	Name	Function Class
Camta1	calmodulin binding transcription activator 1	within coordinates
Cpgi15370	CpG island 15370	571 bp distal
Rr605572	regulatory region 605572	302 bp distal
Rr605573	regulatory region 605573	417 bp distal