rs32774023 SNP Detail

Summary

• ID
  rs32774023
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151420721 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGACGCTG TCTTTCTGGG
  GATACCAGAG GGTCAGCACA GCAAAGGAAC ACCAAAAGCC AGTGTCTAAG TACATGTTCT
  GTAAGAAGGG TATGGGGGTG AGCTCTCAGA GATAGCAAAA AGGACCAGAT CTGCACAGGA
  AAGGGAGGGC AAAGGGCATT TCAGGGGTGG GGTGAAGAGT GGACAGTGTG GATACCACAT
  Y
  GAGACTGGTG ACTCACCATT CAAACATGAG GACCTGAGTT CAAATCCCCA ATATCCACAT
  GACATAAGTG CCTGTAATCC CATCATCCCT AGAGGTGGAC ACAGGAGACT TCCTGGAAAT
  TTGAGAGTCA GCTACCCGGA TGTACAACAG CAGCAAATGA CAAAAGAGAG ACTTGTCTCT
  GAAGGTAGAA AGCAAGGACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46726767	NES10996200	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32774023					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46726767	NES10996200	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151420721 () rs orientation: forward

Symbol	Name	Function Class
Camta1	calmodulin binding transcription activator 1	within coordinates
Cpgi15370	CpG island 15370	871 bp distal
Rr605572	regulatory region 605572	602 bp distal
Rr605573	regulatory region 605573	717 bp distal