rs32775270 SNP Detail

Summary

• ID
  rs32775270
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:155926922 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGGG CTCAAACTCA CCGAGATCTG
  Y
  CTGCCTCTGC CTCCTGAGTG ATGAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45692078	mCV24239046	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss148117703	ENSMUSSNP3000283	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
ss321443292	CHEV_4_155216574	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32775270					SNP	C	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155926922 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15490	CpG island 15490	302 bp distal
Gm68629	predicted gene, 68629	535 bp upstream
Mxra8	matrix-remodelling associated 8	within coordinates
Rr398927	regulatory region 398927	981 bp downstream
Rr606590	regulatory region 606590	1797 bp distal
Rr606591	regulatory region 606591	1360 bp distal
Rr606592	regulatory region 606592	854 bp distal
Rr606593	regulatory region 606593	1297 bp distal
Tssr40729	transcription start site region 40729	1357 bp downstream
Tssr40730	transcription start site region 40730	1327 bp downstream
Tssr40731	transcription start site region 40731	1298 bp downstream
Tssr40732	transcription start site region 40732	1290 bp downstream
Tssr40733	transcription start site region 40733	989 bp downstream
Tssr40734	transcription start site region 40734	586 bp upstream
Tssr44980	transcription start site region 44980	1410 bp upstream
Tssr44981	transcription start site region 44981	1361 bp upstream