rs32779387 SNP Detail

Summary

• ID
  rs32779387
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136506143 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTGTCTGC ACCTCTGGAA TTGGCTTTGC
  TTCCCTCATT CCCAGAGTTA CGGGTGGACA GACAGGGCTC ACAGTCAGTG GCGAGGCTGT
  GTTTCGCTTT ACCAATGCCT CCCCTGACAG GGGTCAAAAG GACTGTCTAT CAAACACAAC
  R
  CCTGCTGTGT CCTTCCTGTG TGAACTCTAT GATAAGCCAC GATCCTCTCT TCCTCTTCTT
  CATTCACTCT GAAAAGCAAT CAAAAAGGAA GTACTGTTCC ATGCAGTTTA CAGGAACTCG
  GTGACTCTGG GGATGAAATT GTAACTTAAC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45193626	mCV23236774	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss145558968	ENSMUSSNP1352479	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
ss319996191	CHEV_1_138474982	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32779387					SNP	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136506143 () rs orientation: forward

Symbol	Name	Function Class
4933409D19Rik	RIKEN cDNA 4933409D19 gene	within coordinates
Gm33994	predicted gene, 33994	within coordinates
Gm57131	predicted gene, 57131	within coordinates
Rr367011	regulatory region 367011	1099 bp upstream
Rr419471	regulatory region 419471	within coordinates
Rr419472	regulatory region 419472	938 bp proximal
Rr419473	regulatory region 419473	1062 bp proximal
Tssr9072	transcription start site region 9072	1235 bp upstream
Tssr9073	transcription start site region 9073	1261 bp upstream