rs32781750 SNP Detail

Summary

• ID
  rs32781750
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:56627877 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTACTCTAC TTGTAGCAAT
  GGAAGGATTG GCCAGACTGT CACCATATAT TGTGGATCAA GAGGATAGAT GCCAGTTGGA
  CTCTCAAAAA TCCTGGATTC CTTCCTGGCT TCAGCTTCCA CATCTGTAAC ATGGGTCTAA
  ACGGGCCTGT GGCAGGGGAA GCTATGGGTG TCTGGTGTCT CTCTGGAGCC TGGCCTCAGC
  R
  AGAGGGAAAT GGTGGCTGAG GTGAGGTCTT CACCTGTCAG AGGCCCAAGG GACTGTTCAG
  AGGTGAAACC AGACCTGGAC TGCAGTGGGC CCCTCCCCCA CCAAGGTCAG CTGTGTGACT
  TGGGGACAGA CATCCCACTC CTCTGGCCTC AGTTTCCTCT ACTCTGGAAT GAAGGAGACG
  GGAGACTGAT GCTTGACATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47712430	NES11328080	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32781750					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47712430	NES11328080	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:56627877 () rs orientation: forward

Symbol	Name	Function Class
Gm53525	predicted gene, 53525	1163 bp downstream
Lingo1	leucine rich repeat and Ig domain containing 1	within coordinates
Rr204237	regulatory region 204237	1950 bp proximal