rs32783538 SNP Detail

Summary

• ID
  rs32783538
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:63072661 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCTG TCCCTCCAGT TCTTCCCCCA
  R
  GATCTCAGAA GATACAGGTA GCCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45693536	mCV22655790	ABI	CRAMUS_MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs32783538					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:63072661 () rs orientation: forward

Symbol	Name	Function Class
Ambp	alpha 1 microglobulin/bikunin precursor	252 bp upstream
Rr593478	regulatory region 593478	within coordinates
Tssr37530	transcription start site region 37530	1832 bp downstream
Tssr37531	transcription start site region 37531	1771 bp downstream
Tssr42025	transcription start site region 42025	1796 bp upstream
Tssr42026	transcription start site region 42026	1754 bp upstream
Tssr42027	transcription start site region 42027	1738 bp upstream
Tssr42028	transcription start site region 42028	1718 bp upstream
Tssr42029	transcription start site region 42029	274 bp upstream
Tssr42030	transcription start site region 42030	127 bp upstream
Tssr42031	transcription start site region 42031	366 bp downstream
Tssr42032	transcription start site region 42032	413 bp downstream