rs32784366 SNP Detail

Summary

• ID
  rs32784366
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:55419765 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCGGACAA TAGTGGATTC
  ACCAAAACTC TTGGTGAGTT TAAGGGCCCA TTTTCTTTCA AACCACCACA CCCATCATTT
  GACTTTTTAA ACTTTAGACA ATAGAGATTA ATGAGGCTCA CTGCTGGGCT TTGGCTCCTT
  GTTGGTAAGG TAAAACAAGA CACCGGTCTT GTTTTTGTCC TGAGAGCTTT TATTATTATT
  R
  TTATCATCAT TATTAATTTT ATTACTATTT ACATCCCCAC CACAGTCCTT TGCCCCTCCC
  CTACCACATC TCCTCTTTCT TCTATTCAGA GAAGGGCAGG CCTCCTATGA ATAGCAACCA
  AACATGGTGT AAGAAAGTTA CAATATGACT AGACACTTCC TTTCATAGTA AAGCCGGATG
  AGCCAACCCA GTTTGAGGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49399763	NES12785384	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	G	G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32784366					SNP	A	A	A	A	A	A	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49399763	NES12785384	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:55419765 () rs orientation: forward

Symbol	Name	Function Class
Cpgi265	CpG island 265	1167 bp proximal
Gm8531	predicted gene 8531	589 bp downstream
Rr371308	regulatory region 371308	1914 bp downstream