rs32785078 SNP Detail

Summary

• ID
  rs32785078
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:41366884 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCAA TGGAAAAGGA AGTGGGGTGT
  R
  TGTATGGCAA AGAAGATGGT GAAGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46191052	mCV24417981	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss144675719	ENSMUSSNP1831965	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss322633686	CHEV_8_41999201	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32785078					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:41366884 () rs orientation: forward

Symbol	Name	Function Class
Rr662625	regulatory region 662625	887 bp proximal
Slc7a2	solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	Intron
Tssr77038	transcription start site region 77038	1210 bp downstream
Tssr77039	transcription start site region 77039	111 bp upstream
Tssr77040	transcription start site region 77040	156 bp upstream
Tssr77041	transcription start site region 77041	1064 bp upstream
Tssr77042	transcription start site region 77042	1206 bp upstream
Tssr77043	transcription start site region 77043	1801 bp upstream
Tssr77044	transcription start site region 77044	1991 bp upstream