rs32785087 SNP Detail

Summary

• ID
  rs32785087
• Variation Type
  SNP
• Alleles
  C/G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132459832 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCTG CCCTCCCGCC CCGCTAGTCC
  B
  GCAGGAAGGG GGCGGGGCAG TCGTC                                      
  
  B = C/G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss45694643	mCV24227732	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
ss147477617	ENSMUSSNP5010122	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G
ss321335968	CHEV_4_132288436	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs32785087					SNP	T	G	G	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132459832 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14969	CpG island 14969	within coordinates
Cpgi14970	CpG island 14970	936 bp proximal
Rr398540	regulatory region 398540	36 bp upstream
Rr601049	regulatory region 601049	66 bp distal
Rr601050	regulatory region 601050	within coordinates
Rr601051	regulatory region 601051	15 bp proximal
Smpdl3b	sphingomyelin phosphodiesterase, acid-like 3B	445 bp downstream
Tssr39417	transcription start site region 39417	678 bp downstream
Tssr43695	transcription start site region 43695	800 bp upstream
Tssr43696	transcription start site region 43696	83 bp upstream
Tssr43697	transcription start site region 43697	within coordinates
Tssr43698	transcription start site region 43698	44 bp downstream
Xkr8	X-linked Kx blood group related 8	within coordinates