rs32785096 SNP Detail

Summary

• ID
  rs32785096
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27748479 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTCATGTAGA GGGAAGAGGT AATTTTATGG GAATCTGTTC CCGAGCTCTC ATAGGGATGA
  AACTCAGGTT AGATTTGGCA ATAAGTACCT TTATCTGCTT GGTCATCTCA ATCCCCCATA
  TCCTTTTATA TTCCATTAGA AGACTTGATA TGAATGAGTG CCTGCTCTGA GAGAGGCAGA
  AATCACCATA GGCAAAATGG GTCTGCAAGA GAAAGAATTG AGCAGGGAAT TTGTAAGAAA
  ACTCTAAAAC GATCATTCTC AGGGCCATGT GGTTCGCAAA GCCCAGGAGG GAAGCTTATC
  W
  TCCCTGGAAA GCTACTCAAT GGAGCTACCA AGGCAGGGAA ACGGTGCTTA CCCTCAGGCT
  CAGGTCCCTC CTAGCTGTGG CTGTAGGCTT GTGGGCAATC ATCTTTAACT CCTCAACTTA
  TCCAAGTGCC TTAGGGGTAA TAGAACACTG TCTTAGTCAG TGTTCTATTG CTGTGACGAG
  ATACCATGAC CACTGCAACT CTTATAAAAG AGCACATTCA ATTGAGGTTT CTTGCTGTTT
  CAGAGGTTTA GTCCATTGTC ATCATGGCAG GGAGCATGGT GGCACACAGG CAGACATGGT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46191249	mCV24519122	ABI	CRAMUS_MOUSE	f	SNP	T	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32785096					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27748479 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20220	CpG island 20220	1487 bp proximal
Eif4ebp1	eukaryotic translation initiation factor 4E binding protein 1	1876 bp upstream
Rr176179	regulatory region 176179	1479 bp distal
Rr186444	regulatory region 186444	921 bp proximal
Tssr76776	transcription start site region 76776	1870 bp upstream
Tssr76777	transcription start site region 76777	1881 bp upstream
Tssr76778	transcription start site region 76778	1944 bp upstream
Tssr76779	transcription start site region 76779	1978 bp upstream