rs32786657 SNP Detail

Summary

• ID
  rs32786657
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:41340275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTCT GTCCCCCCAC TGTCCCCTTT
  Y
  GCCATTCAGA AGTGAAGAAA TTACC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46191667	mCV24416926	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss144674387	ENSMUSSNP1356443	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss322633452	CHEV_8_41972592	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32786657					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:41340275 () rs orientation: forward

Symbol	Name	Function Class
Rr662620	regulatory region 662620	within coordinates
Slc7a2	solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	within coordinates
Tssr76993	transcription start site region 76993	1595 bp downstream
Tssr76994	transcription start site region 76994	592 bp downstream
Tssr76995	transcription start site region 76995	614 bp upstream
Tssr76996	transcription start site region 76996	669 bp upstream
Tssr76997	transcription start site region 76997	778 bp upstream
Tssr76998	transcription start site region 76998	1163 bp upstream
Tssr81068	transcription start site region 81068	134 bp upstream