rs32787211 SNP Detail

Summary

• ID
  rs32787211
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:38059910 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGACAGCCT TTAGGAATCA
  GCTCTCAGGA CCACTCAGCT TCAGGAATCA AACATGGGCT ACCCACTTGG TAGCTTTTCC
  CCTTTATCTG CTAAGTCTTG TTACTGACCT CGTTTGTCTT TTTTGGTAAT TGAAGTAAAT
  TGATCAGTAA TTGAAATATA AATATTCTAC CTGATTGCTT TCTTTTTTTG TTTGTTTTTT
  W
  AATTTTTTTT TCGAGGCAGG GTCTCTGTGT GTAGCCCTGG CTGTGCTAGA ACTCACTCTG
  TAGACCAGGC TGGCCTCCAA CTCACAGATT TTCAACTGCC TTTGCCTTCT GAGCTCTGGG
  ATTAAAGGTG TGTGCTGATT GCTTTCTCTT AGAATAAATA TATCTAAATA TCAGGTGATT
  TAGATTTCTA AAAATAATAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45193833	mCV23752690	ABI	CRAMUS_MOUSE	f	SNP	T	A	T	T
ss148947753	ENSMUSSNP3272119	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		T
ss319692416	CHEV_1_38077674	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32787211					SNP	T	A	T	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:38059910 () rs orientation: forward

Symbol	Name	Function Class
Eif5b	eukaryotic translation initiation factor 5B	within coordinates
Rr16031	regulatory region 16031	510 bp distal
Tssr6339	transcription start site region 6339	1806 bp downstream
Tssr6340	transcription start site region 6340	1780 bp downstream
Tssr6341	transcription start site region 6341	1748 bp downstream
Tssr6342	transcription start site region 6342	1720 bp downstream
Tssr6343	transcription start site region 6343	1702 bp downstream
Tssr6344	transcription start site region 6344	1666 bp downstream
Tssr6345	transcription start site region 6345	1637 bp downstream
Tssr6346	transcription start site region 6346	1586 bp downstream
Tssr6347	transcription start site region 6347	1549 bp downstream
Tssr6348	transcription start site region 6348	1409 bp downstream
Tssr6349	transcription start site region 6349	1347 bp downstream
Tssr6350	transcription start site region 6350	838 bp upstream
Tssr6351	transcription start site region 6351	875 bp upstream
Tssr6352	transcription start site region 6352	901 bp upstream
Tssr6353	transcription start site region 6353	924 bp upstream
Tssr6354	transcription start site region 6354	1405 bp upstream
Tssr6355	transcription start site region 6355	1444 bp upstream
Tssr11327	transcription start site region 11327	1358 bp downstream