rs32789939 SNP Detail

Summary

• ID
  rs32789939
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:181548768 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTCTGAGA CTATAACAAA
  TTCACTGTTT ATATTATTTT TATATATATT ATTATTTTAC TTATTCACTT TACAACCTAC
  TCACAGTCCC CCTCCTGGTC ACCCCCTCCC ACAACCCTAC CTGCCTCCAG CCTCTCCTCC
  TGCACCCTCT GGGTATCCCC CCACCTTTGC ACATTCTATG AGACTATAGT CGCATCCTCT
  Y
  CTACTGATGC CAGACAAGGC AGCCCAGCTA GAAATAGAAC ATATCCCACA TACAGGCAAC
  AGCTTTTAGG ATAGCCCCAA CATATGTGTG GGAAGGCCTA GGTCCAGCCT GTGTATATTC
  TTTGGTTGGT AGTTCAGTCT CTGAGAGCCC CAAGGGTCCA GGCTAGTTGA CTCTGTTGGT
  CTTCCTGTGG AGTTCTTATC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46729438	NES10631051	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32789939					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46729438	NES10631051	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:181548768 () rs orientation: forward

Symbol	Name	Function Class
Dnah14	dynein, axonemal, heavy chain 14	Intron
Rr424786	regulatory region 424786	1671 bp proximal