rs32790809 SNP Detail

Summary

• ID
  rs32790809
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:75826355 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGGA GTTCGTGAAC TCCTATCTTT
  R
  AAGGTATTTG AGCAGTGGCT AGTGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46191466	mCV22618749	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G
ss145201672	ENSMUSSNP5661033	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss322714542	CHEV_8_77623626	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32790809					SNP	G	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:75826355 () rs orientation: forward

Symbol	Name	Function Class
Hmox1	heme oxygenase 1	within coordinates
Tssr78062	transcription start site region 78062	891 bp downstream
Tssr78063	transcription start site region 78063	150 bp upstream
Tssr78064	transcription start site region 78064	180 bp upstream
Tssr78065	transcription start site region 78065	229 bp upstream
Tssr78066	transcription start site region 78066	279 bp upstream
Tssr78067	transcription start site region 78067	309 bp upstream
Tssr78068	transcription start site region 78068	348 bp upstream
Tssr78069	transcription start site region 78069	393 bp upstream
Tssr78070	transcription start site region 78070	442 bp upstream
Tssr78071	transcription start site region 78071	491 bp upstream
Tssr78072	transcription start site region 78072	512 bp upstream
Tssr78073	transcription start site region 78073	573 bp upstream
Tssr78074	transcription start site region 78074	625 bp upstream
Tssr78075	transcription start site region 78075	650 bp upstream
Tssr78076	transcription start site region 78076	689 bp upstream
Tssr78077	transcription start site region 78077	781 bp upstream
Tssr81819	transcription start site region 81819	879 bp upstream
Tssr81820	transcription start site region 81820	859 bp downstream