rs32795206 SNP Detail

Summary

• ID
  rs32795206
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:58998649 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTGCGTCG GTGCCCAGAG
  CACAGGGCCA GGCGCCATGC TCTTCAAACA CAGGAGGCTG CGTGCAGGAC CCTGCGTCAG
  GTGCCCAGAG CACAGGGCCA GGCGCCATGC TCTTCAAACA CAGGAGGCTG CGTGCAGGAC
  CCTGCGTCAG GTGCCCAGAG CACAGGGCCA GGCGCCATGC TCTTCAAACA CAGGAGGCTG
  M
  GTGCAGGACC ATCCAGAACT GCAGTACAGT TTAAAGAGGG CTGGGTGACG CTCAGGATGC
  AGGCATGTTT ACTATAAACA TCTTTATAAA CACATGCAGC TCCGCATATC TAAGACATGT
  AAGTATTTTA ATGTAATTCT ACCACACAAA AGAATTTTCA ATTATATTTG TCATAAACCT
  AAGCCTTGTT TTGCAAAGCC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ
ss49400947	NES12799982	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	C	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ
rs32795206					SNP	A	A	A	A	C	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49400947	NES12799982	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:58998649 () rs orientation: forward

Symbol	Name	Function Class
Gm70794	predicted gene, 70794	1292 bp downstream
Gm70797	predicted gene, 70797	within coordinates
Rr371350	regulatory region 371350	46 bp downstream
Rr411537	regulatory region 411537	1244 bp distal
Rr411538	regulatory region 411538	1781 bp proximal
Trak2	trafficking protein, kinesin binding 2	within coordinates