rs32795208 SNP Detail

Summary

• ID
  rs32795208
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:58998509 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGCGCCATG CTCTTCAAAC ACAGGAGGCT GAGTGCAGGA
  CCCTGCGTCG GTGCCCAGAG CACAGGGCCA GGCGCCATGC TCTTCAAACA CAGGAGGCTG
  M
  GTGCAGGACC CTGCGTCAGG TGCCCAGAGC ACAGGGCCAG GCGCCATGCT CTTCAAACAC
  AGGAGGCTGC GTGCAGGACC CTGCGTCAGG TGCCCAGAGC                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss49400949	NES12799981	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	A	C	C	A
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32795208					SNP	C	C	C	A	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49400949	NES12799981	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:58998509 () rs orientation: forward

Symbol	Name	Function Class
Gm70794	predicted gene, 70794	1432 bp downstream
Gm70797	predicted gene, 70797	109 bp upstream
Rr371350	regulatory region 371350	within coordinates
Rr411537	regulatory region 411537	1104 bp distal
Rr411538	regulatory region 411538	1921 bp proximal
Trak2	trafficking protein, kinesin binding 2	within coordinates