rs32795894 SNP Detail

Summary

• ID
  rs32795894
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:58998252 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACTAAGAT ACTAGATTAC
  AAAAGGGGCT GGCAGCTGAG CTTCTAGTGC CACAGAATAC TAACAACTAA CTAAACAGAT
  GCAATCATGC TGTCAGGCTT AAGGCTGTCC TGGGAAATCA AACAGCTCCG ACCCCTTGAG
  AACAGCAATT TCAGGGCAGC AGTAAGGAAT ATCAAAATGC TAAACAGAAA GAGTGAGAAG
  R
  AATGTATGCT CATCTATTCT CTATATCTTT TAAGAATAAA AATAATTTGG TTTTGGTATT
  AAAATCATCA CAAATCCTTC AGTTACGTAA AAACCGCAGA ACTCGGAGGT TTTAGAAGCA
  GAAGCTCCCC TGCGTCGGTG CCCAGAGCAC AGGGCCAGGC GCCATGCTCT TCAAACACAG
  GAGGCTGAGT GCAGGACCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49400955	NES12799978	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32795894					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49400955	NES12799978	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:58998252 () rs orientation: forward

Symbol	Name	Function Class
Gm70794	predicted gene, 70794	1689 bp downstream
Gm70797	predicted gene, 70797	366 bp upstream
Rr371350	regulatory region 371350	within coordinates
Rr411537	regulatory region 411537	847 bp distal
Trak2	trafficking protein, kinesin binding 2	within coordinates