rs32796182 SNP Detail

Summary

• ID
  rs32796182
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84469002 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATAGA GGAAGAGAGA GCTTTGACCA
  Y
  GGGACATGGC TTACCACGGC AGGGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46193137	mCV23004500	ABI	CRAMUS_MOUSE	f	SNP		T					C		T
ss51971727	NES14984929	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T		C		T		C	T	T	C		C
ss145361196	ENSMUSSNP3953410	ENSEMBL	ENSEMBL_Sanger	f	SNP		T							T
ss322745689	CHEV_8_86266272	CHEVERUD	SCREENING_POP	f	SNP											T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32796182					SNP	T	T	T	T	T	T	C	C	T	T	T	C	T	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51971727	NES14984929	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84469002 () rs orientation: forward

Symbol	Name	Function Class
Adgre5	adhesion G protein-coupled receptor E5	1190 bp upstream
Cpgi20655	CpG island 20655	683 bp distal
Gm46046	predicted gene, 46046	within coordinates
Tssr2619	transcription start site region 2619	1972 bp downstream
Tssr2620	transcription start site region 2620	1076 bp downstream
Tssr2621	transcription start site region 2621	182 bp upstream
Tssr78292	transcription start site region 78292	1995 bp downstream
Tssr78293	transcription start site region 78293	1854 bp downstream
Tssr78294	transcription start site region 78294	1799 bp downstream
Tssr78295	transcription start site region 78295	1753 bp downstream
Tssr78296	transcription start site region 78296	1734 bp downstream
Tssr78297	transcription start site region 78297	939 bp downstream
Tssr82051	transcription start site region 82051	1941 bp upstream
Tssr82052	transcription start site region 82052	1183 bp upstream