rs32798555 SNP Detail

Summary

• ID
  rs32798555
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:125323446 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTCT CATGAAGCAC AGAACAGCTA
  Y
  ATGGCCTGAC AGCCTCCTCT TAAGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45195714	mCV24333270	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss145400717	ENSMUSSNP6836277	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
ss319953759	CHEV_1_127292286	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32798555					SNP	T	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:125323446 () rs orientation: forward

Symbol	Name	Function Class
Actr3	ARP3 actin-related protein 3	within coordinates
Tssr13374	transcription start site region 13374	1932 bp upstream
Tssr13375	transcription start site region 13375	871 bp downstream