rs32799289 SNP Detail

Summary

• ID
  rs32799289
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:165915816 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTATCTATCT ATCTATCTAT CCATTCACCC ATTTATCTAT TCATCCATCC ATTTATCTAT
  TCATCCATCC ATTCATCCAT CCATCCATCC ATCCATGTAT CTGTTATCTA TCTATCTATC
  TATCTATCTA TCTATCTATC TATCTATCCA TTCACCCATC TATCTATTCA TCCATCTATT
  CATCCATCCA TCCATCCATG TATCTGTTAT CTATCTATCC ATCCACCCAT CTATCTATTC
  ATCCATCCAT CCATCTGTCC ATCCATCCAT CCATCCATCC ATCCATCCAT CCATCTATCT
  R
  TTATCTATCT ATCTATCTAT CTATCTATCT ATCTATCTAT CTATCTATCT ATCTATCTAA
  TAGCAGACAG ACATCAGGAC AAATCTGTTT AGTGGGCCTA GTTTTAGAGC TATCTGCCTA
  CATTTTGGCC TTGTGTGAAA TGCACATTTG TCCTGACCCC ACTTTCATCC AATGGGCAGT
  CATTTTCTCA GTCTGAGAGA CCTCATGAGG ATGAGTGATT TGCCTAATAT CTCCGTCTGT
  CCTCACACAC TCACATGCAC ACACCCTGAA ATCAATCTGG AAACAGAACC CTAATTTCCC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45195280	mCV22723377	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32799289					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:165915816 () rs orientation: forward

Symbol	Name	Function Class
Rr422527	regulatory region 422527	399 bp proximal
Rr422528	regulatory region 422528	1474 bp proximal