rs32799419 SNP Detail

Summary

• ID
  rs32799419
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:181340521 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCAG ACAAGGTAGC GCAATAATGA
  K
  CCAGGATGGG CGGGGCAAGG TGCAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45195730	mCV25244207	ABI	CRAMUS_MOUSE	f	SNP	T	G	T	G
ss146396681	ENSMUSSNP1627838	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		G
ss320161713	CHEV_1_183443087	CHEVERUD	SCREENING_POP	f	SNP					T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32799419					SNP	T	G	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:181340521 () rs orientation: forward

Symbol	Name	Function Class
Ccdc121rt1	coiled-coil domain containing 121, retrogene 1	1505 bp upstream
Rr424762	regulatory region 424762	1362 bp distal
Rr424763	regulatory region 424763	1451 bp distal
Rr424764	regulatory region 424764	193 bp distal