rs32803752 SNP Detail

Summary

• ID
  rs32803752
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185047082 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTAGTGAC TGCCTTTCTA
  TCCCTCTCAC AGCCCTGGAA TCCCATGGCT CCTACGCACA GCACACACTG CCACCCTGCC
  TCCCGCAGAG CACTCTTCCC TGCCCTCAGC TTAGAATACA AGTCAGTGGT CAGGAATGCA
  CAGGGCCTTG ATATAATTCC TAGCACAAAA TTATTAAAGA TAACAACAAA CCTATCCTTT
  R
  TGTGGTCATA CGTGACTTTT TAAAAAAACA ACAACTTAAA TTAACATTTT TTAAAACTTC
  TAAAATCCAT ACACTCAGAA TGATACTATT AACACATACA ATCACAGCAA CAGTGAAAAC
  CAAATCATCT CAACAACGCC AAGGAATCCC CAGGAAGGGC CGCCAGTCTG GGCCTACAGT
  CTCTCAACCA ACAAACAACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss46730392	NES10645939	PERLEGEN	MM_PANEL2	f	SNP		G	A	G	A	G	A	G	G	A		A		G	G		G
ss146427463	ENSMUSSNP5579037	ENSEMBL	ENSEMBL_Sanger	f	SNP	A												A
ss320174705	CHEV_1_187138764	CHEVERUD	SCREENING_POP	f	SNP											A					G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs32803752					SNP	A	G	A	G	A	G	A	G	G	A	A	A	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46730392	NES10645939	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185047082 () rs orientation: forward

Symbol	Name	Function Class
2010103J01Rik	RIKEN cDNA 2010103J01 gene	1086 bp downstream
Iars2	isoleucine-tRNA synthetase 2, mitochondrial	within coordinates
Mir194-1	microRNA 194-1	1500 bp downstream
Mir215	microRNA 215	1193 bp downstream
Mirc38	microRNA cluster 38, including Mir194-1 through Mir215	1193 bp distal
Tssr10601	transcription start site region 10601	1211 bp downstream