rs32805929 SNP Detail

Summary

• ID
  rs32805929
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:185151301 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTAATATA AACTCTTAGT
  TTTATTTTAT AAACATTTAG CATTTTACCT TTTTTTTTTT TTTTTAATAG CTATGATAGA
  GATTTTTACC TTAGACTGGA AGTTAGGAGT CAAATAAATA TATACCAACT TACATTATAG
  GAGTAGTGTG GAACATGTCC TCACATGGTA GCTGAGATCT TAAGGGTGGA TGCTTCATTT
  S
  TTGGGGTTTT TCACAATCAA CCATCTCACA TTACAAAGCC GCCAGTGTTT ATCATCTTTC
  TTTAAAATGG CTCCTAAGGT CACCCTGTGC TGGGGTTAGT CCCAGTGTTG ACCCTGCTTC
  TCTGTGTGTC ATACTTCTTC ACATGTTCCC CTACCTTCAG GGAAGATACC AGCAGCTACT
  TCTTTAAGCC AGTTTATGTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46731541	NES10640207	PERLEGEN	MM_PANEL2	f	SNP	G	C	G	C	G	G	G	G	C		C	G	C	G		G
ss320175596	CHEV_1_187242983	CHEVERUD	SCREENING_POP	f	SNP										C					G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32805929					SNP	G	C	G	C	G	G	G	G	C	C	C	G	C	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46731541	NES10640207	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185151301 () rs orientation: forward

Symbol	Name	Function Class
Eprs1	glutamyl-prolyl-tRNA synthetase 1	Intron
Rr425382	regulatory region 425382	882 bp distal
Rr425383	regulatory region 425383	1775 bp proximal
Tssr10610	transcription start site region 10610	810 bp downstream