rs32807180 SNP Detail

Summary

• ID
  rs32807180
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:86122975 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTACAGGC CAGCCATGTA
  CCTAGTCCCT GCGAAACAAA ACACCATGAA ATAAAACAAA CAGAACTAGA AGAAAAACAA
  ACAAACAAAT GAACAAATTG GACAAATTGT CCAGGAAGCT GTAATAAAAT TTTGATATCT
  GGATTTTATT CATGATTCTG ATTTAATGGC TCTAGGCACT GAGATTTAAA AAAGGTAGGT
  K
  ATGTTAAAAG GTTTCAGATG AGAAAGCTCA AATAGGAAAA AAGATGGCAG GATGAAGTGC
  AGCAGCATCT ATGGAAGAGA GAAGCAGAAC TAAAGATATG GAAATGCAGC TGTGGTGGAC
  AAAAGAGTAT GTTGTTGGTA GTTGCCACCA CTGGGCATGG TGCCTGAGGG ACCAGCAGGG
  TGGCCTGTAG GAAGCACAAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46731461	NES10760103	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32807180					SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46731461	NES10760103	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86122975 () rs orientation: forward

Symbol	Name	Function Class
Gm66037	predicted gene, 66037	within coordinates
Rr397748	regulatory region 397748	1091 bp downstream