rs32807507 SNP Detail

Summary

• ID
  rs32807507
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:86170340 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATGCTTTT GTTGTTGTAT
  TTATAAGATA GAATCCTAGT GATGAACTCA GGAGTTGGTT AGAGCCATGT ACAGGTTTGG
  TATGTGTTAC CAAATTATTC TCCTGAGTGT GTCTCTCACC TGAACTCTTT TTTTTTTCTT
  TTAAACTAGG CAAAGAACTT TATTAACATT TTCCAAATTT TATTCTTCGG CTTAATTTGC
  Y
  GCAAAGAATG AATTAGGTAA AAGAGAAAAC TGAAAAGAGC TGCAGTGTCC AGGGCGCTTA
  GGCTTAAAAA TATTAGAGAT CTAGATTTTA CCAGATCCAT AATAAACAAA TAATTTTAAA
  AAGCAGTCAT GATATAAAAT AGCAGCTCCT GTAACTTCTG CAAGTGTCAC CTTCTTCAGA
  AGTTGCCATA GGTCAGTTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46731659	NES10758008	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32807507					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46731659	NES10758008	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86170340 () rs orientation: forward

Symbol	Name	Function Class
Btf3-ps12	basic transcription factor 3, pseudogene 12	209 bp downstream
Lrba	LPS-responsive beige-like anchor	within coordinates
Tssr29784	transcription start site region 29784	420 bp upstream