rs32807676 SNP Detail

Summary

• ID
  rs32807676
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:185152266 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGCAGAGT ACAGGTTCAC
  TAGGAATGAG TCTGGGGTGT ACCAGTGACT AACCCCTCAG TGTCCGAGGT GTGTCTGGTT
  TCAAGGTGTC TCTGTCATTC CGTGTACCAT GTGCCATTCC ATGTGCCATT CCATGTGTCA
  TTCCGTGTAC CATGTGCCAT TGGTGAGGAA ATGGGATTCA GAGTAGATGA AGCCATGATA
  Y
  AGTCTGCATG CAACTTGAGA TACACATGCA CTTTTAACTG CCTGTTTTGT TTTACAGGGA
  GTTCCAGTCA GACTTGAGGT GGGGCCACGT GATATGAAGA GCTGTCAGTT TGTAGCAGTC
  AGACGAGATA CTGGAGAGAA ACTGACAATT GCTGAGAAGG AGGCTGAGGC TAAGCTGGAA
  AAGGTTTTGG AAGACATCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46731562	NES10640149	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32807676					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46731562	NES10640149	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185152266 () rs orientation: forward

Symbol	Name	Function Class
Eprs1	glutamyl-prolyl-tRNA synthetase 1	Intron
Rr425382	regulatory region 425382	1847 bp distal
Rr425383	regulatory region 425383	810 bp proximal
Tssr10610	transcription start site region 10610	1775 bp downstream