rs32807790 SNP Detail

Summary

• ID
  rs32807790
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124675319 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAAA GTGGACAGGA CTGAGTTCCA
  K
  GCTGCATTCC TACACTATAT CACAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46194173	mCV24172812	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
ss145836517	ENSMUSSNP7203304	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32807790					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124675319 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21263	CpG island 21263	162 bp proximal
Gm45890	predicted gene 45890	210 bp upstream
Nup133	nucleoporin 133	within coordinates
Rr672577	regulatory region 672577	120 bp proximal
Rr672578	regulatory region 672578	675 bp proximal
Rr672579	regulatory region 672579	695 bp proximal
Rr672580	regulatory region 672580	863 bp proximal
Rr672581	regulatory region 672581	1720 bp proximal
Tssr80007	transcription start site region 80007	830 bp upstream
Tssr80008	transcription start site region 80008	866 bp upstream
Tssr83414	transcription start site region 83414	621 bp downstream