rs32807989 SNP Detail

Summary

• ID
  rs32807989
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148527535 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTTT GGTTTTTCGA GACAGGGTTT
  Y
  TCTGTATAGC CCTGGCTGTC CTGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45696480	mCV24215091	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss148007655	ENSMUSSNP4658170	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs32807989					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148527535 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15303	CpG island 15303	1100 bp proximal
Gm23303	predicted gene, 23303	274 bp downstream
Tssr44605	transcription start site region 44605	1377 bp downstream
Tssr44606	transcription start site region 44606	1655 bp downstream
Tssr44607	transcription start site region 44607	1666 bp downstream
Ubiad1	UbiA prenyltransferase domain containing 1	within coordinates