TCCATCTTGT CTCAGAGACG TCTGGGGGAG CCCAGGAAGG AAGACAGACT CTGTGGTTTA TGTAAACTGT CAGCTTGGCA AGACCTAGAG TCACCTACTT R TTTATTTATT TATTTATTTA TCTATCTATT TATTTATTTA TTTAGAGACA GGGTTTCTCT GTGTAGCCCC GACTGCCCTG AAATTGGCTA TGTACACCA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|
ss45197037 | mCV23930631 | ABI | CRAMUS_MOUSE | f | SNP | A | A | G | ||
ss146505947 | ENSMUSSNP3385588 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | A | G | ||
ss320195295 | CHEV_1_193269210 | CHEVERUD | SCREENING_POP | f | SNP | A | G | |||
SNP Consensus Information | ||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs32808256 | SNP | A | A | G | A | G |
Location: Chr1:191177528 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm32200 | predicted gene, 32200 | within coordinates | ||||||
Rr372646 | regulatory region 372646 | 306 bp upstream | ||||||
Tssr15793 | transcription start site region 15793 | 472 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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