rs32808603 SNP Detail

Summary

• ID
  rs32808603
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:86171570 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAATAAATC TAGTTGGAAT
  CTGTCATAGT TTAAAACATG AATAAGAGAA ACCTTTTCTT ACAGAGAGTC TCTCTAAAAC
  CCAGAACCTC TCCTAGCTTG CTTCCTAAGA CTTAAAAATT TATAATGTAA GATGTCAGCA
  CCTCTTAATT TTAGTTTTCC TAAGATGTTG TAATCATGAG TAACCTCTAT CAACTGAGCA
  R
  AGAGGGAAGT TTATGAAAGC TTAGATATTA TCCAGTTTTA TGTACTTTTT ATTTATGAAT
  CAGTAGTATT TTCTTTTGTG TATTATCCCC AGAACAAAAA TAGAAGTACG ATCATGTATT
  GACAATGAGA AAGCTAAATT CTCTTTAAGA GATTATTAAA TTAAAAGTTA AAATAAGGTT
  TATGTAAATT TATATGTAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46731686	NES10758017	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32808603					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46731686	NES10758017	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86171570 () rs orientation: forward

Symbol	Name	Function Class
Btf3-ps12	basic transcription factor 3, pseudogene 12	688 bp upstream
Lrba	LPS-responsive beige-like anchor	within coordinates
Tssr29784	transcription start site region 29784	806 bp downstream