rs32808862 SNP Detail

Summary

• ID
  rs32808862
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135162213 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGGC ATAGCATCCT CGTCAGAGTG
  R
  CTCCCATAGT GTCCCCCACA GGATC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45697400	mCV25168405	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss321352226	CHEV_4_134990817	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32808862					SNP	G	A	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135162213 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15072	CpG island 15072	349 bp distal
Gm69862	predicted gene, 69862	within coordinates
Rcan3	regulator of calcineurin 3	1059 bp upstream
Tssr39615	transcription start site region 39615	882 bp downstream
Tssr43991	transcription start site region 43991	1033 bp upstream