rs32809108 SNP Detail

Summary

• ID
  rs32809108
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:47955713 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCAACTTT TTAACATTTT
  CAAGTAAGAG CTCCTAATGA TTGAGTACAC TGCGATTATT TTTGAGGACT AGTGACACTT
  ATTCATAGTT CAAAATATGC TTTGGTCATA CAGAGCACAT ATATGCATAC ATGTCAGATA
  TATATATGGT ACTATTTTTA TGTGGACAAA CTGTAGTTGG AGAGTCCTGC ACAACCAAGG
  Y
  CACAGTAGAA CATAATAGAT GTTCATATGT TAAATGTTAT GAATATAGTC CTTCTTGAAG
  ATTTGATTTT ATTTAATTTG ATTCACAAAT AGATTACATA TATAACTAAT GAAAATACAT
  AATATCCTAG GGGTAAAGGG TAATATCAGC CTAGAATTAC AGGTTATTTT ACAGTATTGA
  ATCTCTAAAA GGCAATTATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J
ss45197609	mCV23233054	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss149077378	ENSMUSSNP830568	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J
rs32809108					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:47955713 () rs orientation: forward

Symbol	Name	Function Class
Gm19206	predicted gene, 19206	717 bp upstream
Rr371240	regulatory region 371240	854 bp downstream
Tssr6618	transcription start site region 6618	884 bp upstream