rs32809134 SNP Detail

Summary

• ID
  rs32809134
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:86181079 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAGCTTTT TCTCTTTTAA
  GATTGTTTTT CTGTTCTCAT TCATTTCTTT CTATATAAGT CTTACAATCA TTATTTTGTC
  CTTCTGTAGA AATCTTTTGG GGATTTATGA TAAAAACGGT TAAATGTACC TATATCACTT
  TTGGGAAGTG TTGGCTTGTA TAAATATATA CCTGTTCTTC ATTTATTGAG CTAAAACACT
  Y
  AAGTTCTACA TGCTTTGGTG GTTTTTATGG CTAAATTGTT TTTATATGTC TACTAGTTGT
  AAATGTCATT TTGATTTCAT TGCCAGTGTT GTTATTGTTT TTTAAAGTTT TATTGTTTCT
  TTGCGAATTT CCCCTTATGC ACCCTAACCC CACTCATGTC TTCCTCGCTG TGTACTCGCT
  TTCTACCCTT GCAACCTCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46731743	NES10757591	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32809134					SNP	C	T	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46731743	NES10757591	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86181079 () rs orientation: forward

Symbol	Name	Function Class
Gm26343	predicted gene, 26343	1460 bp downstream
Lrba	LPS-responsive beige-like anchor	within coordinates