rs32811169 SNP Detail

Summary

• ID
  rs32811169
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:61208118 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCGACCCGGT CCGACCCAGT
  CACTCCCGGC TATGGTGTAG ACAGGTGAGG ACAGCCACAC CTAACTGCTG AACCTCATTA
  CCACCCCCAC GTTATTAAAG AATGGAGGGC TTGAAGATGA ACACCTGTGG AGGCCACCAA
  AGTGTGGGCC AGAGACTAGG ATGGGGCCAG CAACACCAGG CCAGAACCTG GCATTTCTGC
  Y
  TCGATCAGGA CAACTAAGCC TCTGGGCTAC CTGTTGCCAG GATCACAACT CTCCTAATGA
  CCACACTTCC TTTTTTTCGC CTCTCTGTAG ATTCTTTTGT GACTTCTGAC TGGGAGGGGT
  GCTCCAACAT GAGATGCCCA TGTCTTCCCT AGAACACTGG CCTGGCCACA CAAAAACCAT
  CGGAGCTTCT GTGACCAGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss47716292	NES11306006	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs32811169					SNP	T	T	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47716292	NES11306006	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:61208118 () rs orientation: forward

Symbol	Name	Function Class
Rr204421	regulatory region 204421	24 bp distal
Rr204422	regulatory region 204422	1981 bp proximal
Rr209972	regulatory region 209972	318 bp distal