rs32812144 SNP Detail

Summary

• ID
  rs32812144
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:59904548 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTATTTTC TATTCTCCTT
  TGTAAGAGCA GTTTGTGTTA TGTGCAGTTT ACACTATTAA TAAATAGAAT GGGCTTCAGC
  TATACACCTT GCATATGGCA AATGAAGGAG AATAGAGACC AGCTGTTCTA AATAGAACAC
  TTTACAAATA TTAGAAAAAT CTTCTGTTTC CATCGTCATT CTATATTTCT ACTGCCCTAC
  W
  GTCTGTAAAC GATGCATTTA TTCATCTCTC AAGATTCAGC TGAAGGGACT AGAGAGATGG
  CTCAGTGGTT AAGAGCCCTT GTTGCTCTTG CAGAGAACCC TAGTTCAGTT CCCAGAACTC
  ACCCACATGG TGACACCTAA ACATGTGTAA CTCCGATTCC AAGAGTCCAA CTCCCTATTC
  TAACCTCTAC AGGTACCACA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49403853	NES12776499	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	T	A	A	A	T	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32812144					SNP	A	A	A	A	A	T	A	A	A	T	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49403853	NES12776499	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:59904548 () rs orientation: forward

Symbol	Name	Function Class
Bmpr2	bone morphogenetic protein receptor type 2	within coordinates
Tssr6906	transcription start site region 6906	1956 bp upstream