rs32812145 SNP Detail

Summary

• ID
  rs32812145
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:59904522 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAGTATAC TTTTCTTGAA
  ATTTTTCCCT ATTTTCTATT CTCCTTTGTA AGAGCAGTTT GTGTTATGTG CAGTTTACAC
  TATTAATAAA TAGAATGGGC TTCAGCTATA CACCTTGCAT ATGGCAAATG AAGGAGAATA
  GAGACCAGCT GTTCTAAATA GAACACTTTA CAAATATTAG AAAAATCTTC TGTTTCCATC
  K
  TCATTCTATA TTTCTACTGC CCTACAGTCT GTAAACGATG CATTTATTCA TCTCTCAAGA
  TTCAGCTGAA GGGACTAGAG AGATGGCTCA GTGGTTAAGA GCCCTTGTTG CTCTTGCAGA
  GAACCCTAGT TCAGTTCCCA GAACTCACCC ACATGGTGAC ACCTAAACAT GTGTAACTCC
  GATTCCAAGA GTCCAACTCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49403855	NES12776498	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	T	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32812145					SNP	G	G	G	G	G	G	T	G	G	G	T	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49403855	NES12776498	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:59904522 () rs orientation: forward

Symbol	Name	Function Class
Bmpr2	bone morphogenetic protein receptor type 2	within coordinates
Tssr6906	transcription start site region 6906	1982 bp upstream